Practical-3-Processing-16S-rRNA-amplicon-data.md

@@ -63,7 +63,7 @@ Next, we want to make file paths for the filtering and trimming step that will b
 Now we move on to actually filtering and quality trimming our reads. Again use `?` to see what filterAndTrim does, and what the various options are here. Although we will later only use the forward reads, we will still trim forward and reverse as pairs!!!
 
 ```plaintext
-> filtered_out <-  filterAndTrim(fnFs, filtFs, fnRs, filtRs, maxN=0, maxEE=c(5,5), compress=TRUE, multithread=8)
+> filtered_out <-  filterAndTrim(fnFs, filtFs, fnRs, filtRs, maxN=0, maxEE=c(5,5), compress=TRUE, multithread=8, minLen=100)
 ```
 
 What is maxEE? Feel free to try out other options like truncQ and truncLen to see if they change the output.