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Before we begin, there's one thing we need to download, which is the formatted silva database used by DADA2 to assign taxonomy.
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$ cd /bioinf/home/your_username/day_1/demultiplexed
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$ cd /bioinf/home/your_username/marmic_NGS2020/day_1/demultiplexed
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$ wget https://zenodo.org/record/1172783/files/silva_nr_v132_train_set.fa.gz
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### 3.1 Processing our data with DADA2
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