Practical-6-MAG-analyses.md

@@ -95,6 +95,9 @@ Then copy and paste the following into it, and change the path to your MAGs, and
 gtdbtk classify_wf --cpus 16 --genome_dir /path/to/MAGs/ --out_dir gtdbtk_classify -x fa
 gtdbtk de_novo_wf --cpus 16 --genome_dir /path/to/MAGs/ --out_dir gtdbtk_denovo -x fa --bacteria --outgroup_taxon p__Deinococcota
 ```
+
+Once you have the modified script, use `Ctrl+O` to write it to the file, then `Ctrl+X` to exit nano.
+
 Now we need to submit the script to Slurm with:
 
     $ sbatch slurm-submit.sh