Practical-6-MAG-analyses.md

@@ -96,6 +96,10 @@ Then copy and paste the following into it, and change the path to your MAGs, and
 gtdbtk classify_wf --cpus 16 --genome_dir /path/to/MAGs/ --out_dir gtdbtk_classify -x fa
 gtdbtk de_novo_wf --cpus 16 --genome_dir /path/to/MAGs/ --out_dir gtdbtk_denovo -x fa --bac120_ms --outgroup_taxon p__Deinococcota
 ```
+Now we need to submit the script to Slurm with:
+
+    $ sbatch slurm-submit.sh
+
 
 Now you can run `squeue` and see if your job is running!