Practical-6-MAG-analyses.md

@@ -10,10 +10,10 @@ $ rm checkm_data_2015_01_16.tar.gz
 $ rm -r checkm_data_2015_01_16
 
 ```
-then load your marmic2021 environment and get checkm:
+then make sure you are outside a conda environment and run:
 
 ```
-$ conda install -c bioconda checkm-genome 
+$ conda create -n checkm -c bioconda checkm-genome
 ```
 
 If everything went well you should be able to run checkM on your generated bins using a command like the one below. Please select no more than 20 MAGs so you don't have to wait forever.