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Feel free to explore other options available in the ani.rb and aai.rb script.
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What can you say about the possible level of novelty of these bins? What is the level of relatedness between the bins and references detected by checkM? |
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What can you say about the possible level of novelty of these bins? What is the level of relatedness between the bins and references detected by checkM? Make sure to make meaningful comparisons: For instance, how bins identified by GTDB-tk as belonging to same species compare between Illumina and PacBio using ANI? or AAI? how would you explain these results? |
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