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To annotate our amino acid sequences, we are using the Pfam database which is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs).
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Pfam-A.hmm is a library containing Pfam-A HMMs and is searchable with `hmmsearch`.
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Pfam-A.hmm is a library containing Pfam HMMs and is searchable with `hmmsearch`.
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You can find the library here:
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```
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/bioinf/courses/symbiosis_bioinfo-2024/pfam-A/Pfam-A.hmm
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